Pairwise Alignments

Query, 255 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 250 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  228 bits (581), Expect = 9e-65
 Identities = 111/235 (47%), Positives = 169/235 (71%), Gaps = 2/235 (0%)

Query: 1   MEWLTNPEIWIAFFTLTALEIVLGIDNIIMISILVSRMPKHMQARTRIFGLALAMVTRIL 60
           ++   +P  W+A  TL  +EIVLGIDN+I ISIL +++P+  +A+ R  G+++A+V R+ 
Sbjct: 5   LQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALVLRLG 64

Query: 61  LLLSITWVMQLTNDLFVVFGQGISGRDLILFFGGLFLLWKSSQEMYHALEGEDETHDEPK 120
           LL +I +++QLT  +F VFGQ  S +D+IL  GGLFL+WK++ E++H+++ E E  +   
Sbjct: 65  LLSTIAFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEKETSA 124

Query: 121 G--AGGKFIYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVAAIVVAVLVMMLAAGTISE 178
           G      F   I QI ++D+VFS+DS+ITAVGM  H+P+M+ A+V +V+VM++AA  +++
Sbjct: 125 GNVVAIGFAAAIGQILLLDLVFSIDSIITAVGMTEHLPIMIIAVVTSVIVMLVAAEPLAK 184

Query: 179 FIDKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAVNIKMR 233
           FI+ +P++ MLAL FL+++G  LIAE F  HVPKGYVY AMAFS A+E +NI  R
Sbjct: 185 FINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIECLNIARR 239