Pairwise Alignments

Query, 255 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 523 a.a., putative transporter from Pseudomonas putida KT2440

 Score =  219 bits (557), Expect = 1e-61
 Identities = 107/249 (42%), Positives = 164/249 (65%), Gaps = 1/249 (0%)

Query: 1   MEWLTNPEIWIAFFTLTALEIVLGIDNIIMISILVSRMPKHMQARTRIFGLALAMVTRIL 60
           MEWL +P  W+   TL  LE+VLGIDN++ I+IL  ++P H + R R+ GL+LA++ R+ 
Sbjct: 1   MEWLADPTAWLGLLTLIVLELVLGIDNLVFIAILADKLPPHQRDRARVIGLSLALIMRLG 60

Query: 61  LLLSITWVMQLTNDLFVVFGQGISGRDLILFFGGLFLLWKSSQEMYHALEGEDETHDEPK 120
           LL SI+W++ LT  LF VFG+  SGRDLI+ FGG+FLL+K++ E++  LEG   T     
Sbjct: 61  LLASISWMVTLTAPLFEVFGKSFSGRDLIMLFGGVFLLFKATMELHERLEGH-VTQASGT 119

Query: 121 GAGGKFIYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVAAIVVAVLVMMLAAGTISEFI 180
                F   + QI ++D VFSLD+VITAVGMV  + VM+ A++ ++ +M++A+  ++ F+
Sbjct: 120 LRHAAFWPIVAQIVVLDAVFSLDAVITAVGMVDELSVMMIAVIFSIGIMIVASKPLTRFV 179

Query: 181 DKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAVNIKMRTAIAKKK 240
           + HP++ ML L FL+++G  L AE    H+PKGY+Y A+ FS+ +E  N   R    +  
Sbjct: 180 NAHPTVIMLCLGFLMMIGFSLTAEGLGFHIPKGYLYAAIGFSILIELFNQLARARRKRSL 239

Query: 241 KQQDPVKLR 249
           +Q  P++ R
Sbjct: 240 QQHRPLRER 248