Pairwise Alignments

Query, 338 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 310 a.a., 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF from Erwinia tracheiphila SCR3

 Score =  331 bits (848), Expect = 2e-95
 Identities = 164/306 (53%), Positives = 218/306 (71%), Gaps = 9/306 (2%)

Query: 31  LHPRNRHTGRYDFPALIKTTPELAQFVIINPYGKESIDFASPDAVRVFNRALLKAFYGIQ 90
           LHPRNRH GRYDF ALI + P L +FV +N  G ES+DFA+P AVRV N+ALL+ FY I 
Sbjct: 10  LHPRNRHRGRYDFAALIASHPALVEFVSVNACGDESVDFANPAAVRVLNQALLRHFYQIA 69

Query: 91  HWDIPADYLCPPVPGRADYVHFLADLLASTNDGKIPRGSIVKVLDIGMGANCVYPLIGYM 150
           HW +P   LCPPVPGRADY+H+LADLLA  N  ++PR   + VLDIG GANC+YPLIG  
Sbjct: 70  HWTLPDGSLCPPVPGRADYIHYLADLLAEDNKSQVPRN--INVLDIGCGANCIYPLIGQY 127

Query: 151 EYRWNFLGSEVDPIAVAAARAIVQSN-DLSKVIQLRQQTNPKQILLGLLEPGERFDLTMC 209
           EY W F GSEV+  A+ +A +++ +N  L++ ++LR+Q +P+ I  G++   E +   MC
Sbjct: 128 EYGWRFTGSEVNEAAMRSATSVIAANPGLARQVRLRRQKDPQAIFNGIVHKNEHYHAVMC 187

Query: 210 NPPFHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAES 269
           NPPFHAS  +A +GS+RK R LG  D +     LNFGGQ  ELWCEGGE  F++++IAES
Sbjct: 188 NPPFHASASDAREGSQRKVRNLG-LDSRAP---LNFGGQQDELWCEGGEKAFISRMIAES 243

Query: 270 AHFAHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF--QTKN 327
              A + +WF++LVS+  NLP +  AL++AG +  + V+M+QGQKQSRF+AWTF  Q + 
Sbjct: 244 VLVARQCIWFTSLVSRRENLPDLWRALEQAGAVAVRTVDMAQGQKQSRFIAWTFLQQPQR 303

Query: 328 EQQIWR 333
           EQQ+ R
Sbjct: 304 EQQMSR 309