Pairwise Alignments

Query, 325 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 331 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  112 bits (281), Expect = 1e-29
 Identities = 91/307 (29%), Positives = 138/307 (44%), Gaps = 24/307 (7%)

Query: 12  AALAWLSLLHDQP-SGGDQATFSQWLRADPAHVEAYAQAQVLWELSEVPARKLADEEALV 70
           AA  W   LH    +  ++  F QW  A P H   YA    +W++++   R   +  A V
Sbjct: 17  AAAHWCMRLHAVDCTASERQAFEQWHDAHPLHAFEYAAMLEIWDVADHLPRN--EPTATV 74

Query: 71  LQGYLNAMNPSKRSRVARWSGALAMAACLLLMVFMG--VGWQPSRWVDDFGADYVTAPGE 128
           +        P +R R    + A+ + A L L  F G   GW PS +      +   A   
Sbjct: 75  VP-----FKPRRRLRTYAVAAAICLVA-LPLAAFTGWEAGWLPSSY------ERFDATHG 122

Query: 129 VKTVTLADQSQVTLDADSAIAVDFTQGERHIQLRRGAGFFSVTH-TGQSFVVEAGSGEAR 187
           ++ VTL D SQV L+  + +     + +R + L++G  FF V+H T   F+V AG G+ R
Sbjct: 123 LRQVTLGDGSQVELNLGTQLVYSNYKDQRRVTLKKGEAFFKVSHDTAHPFIVHAGEGQVR 182

Query: 188 VLGTQFEVRLQPAGAEVTVLSGRVGVTPSKQGQQQILTAGQQVAYAEGVADALHAV---- 243
           V GTQF V        VT+L G V ++  K      LT G Q  Y  G  DA   V    
Sbjct: 183 VTGTQFNVWKYEDQVRVTLLEGSVQISSDKVHGSVPLTPGMQANYQHG--DATPRVRTMS 240

Query: 244 DSESRLAWRDGWLNYYKAPLSDVVKDLERYYPGRILLLNKEMGAKRVSGSFPSKDPQAVL 303
            +++ LAWR G L      L+D +  + RY    ++L +   G  R+ G +   +   ++
Sbjct: 241 PNDTALAWRQGKLILDNLALADALPLINRYLSKPVMLADANTGTIRIGGIYNINEVNNLV 300

Query: 304 NALQAVL 310
            +L  VL
Sbjct: 301 PSLPKVL 307