Pairwise Alignments

Query, 325 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  342 bits (878), Expect = 6e-99
 Identities = 180/321 (56%), Positives = 227/321 (70%), Gaps = 3/321 (0%)

Query: 6   TPAQEQAALAWLSLLHDQPSGGDQATFSQWLRADPAHVEAYAQAQVLWELSEVPARKLAD 65
           T AQ QAAL W + +++QP   + A F +WL ADPAH  AY QAQVLW+ S  PA +LAD
Sbjct: 8   TEAQFQAALQWFNRINEQPGQAEGAAFKRWLLADPAHRAAYDQAQVLWQKSAAPAARLAD 67

Query: 66  EEALVLQGYLNAM-NPSKRSRVARWSGALAMAACLLLMVFMGVGWQPSRWVDDFGADYVT 124
           EE   LQ YL+AM  P  R    R +G LA+AACL+L V +  GW P  W+ D  ADY +
Sbjct: 68  EEQDALQRYLDAMARPPARGGWRRVAG-LALAACLVLAVGVAGGWHPGYWLQDLQADY-S 125

Query: 125 APGEVKTVTLADQSQVTLDADSAIAVDFTQGERHIQLRRGAGFFSVTHTGQSFVVEAGSG 184
           + G+++ V LADQSQVTLDA SAIAVDF QGER ++L  GA FF VTHTG+ F+VEA  G
Sbjct: 126 STGQIRQVILADQSQVTLDAGSAIAVDFAQGERRVRLLHGAAFFEVTHTGEPFLVEAAGG 185

Query: 185 EARVLGTQFEVRLQPAGAEVTVLSGRVGVTPSKQGQQQILTAGQQVAYAEGVADALHAVD 244
           E RVLGTQFEVR Q  GA+VTV SGRVGV+P++    + LTA QQ+ Y  G      AVD
Sbjct: 186 EVRVLGTQFEVREQGEGAQVTVRSGRVGVSPAQGTVARELTANQQLTYRAGRVGDTLAVD 245

Query: 245 SESRLAWRDGWLNYYKAPLSDVVKDLERYYPGRILLLNKEMGAKRVSGSFPSKDPQAVLN 304
           S++RLAWR GWLNYY+ PL+ V+ DL RYYPGRILLL+ ++G ++VSGSFP  +P   L+
Sbjct: 246 SDNRLAWRQGWLNYYQVPLAQVIDDLGRYYPGRILLLDGDLGQRKVSGSFPVAEPLLALD 305

Query: 305 ALQAVLGFEQHTLLGRMIVVR 325
           +L  V+GF + T+LGR+ +VR
Sbjct: 306 SLGKVMGFSRQTVLGRLTLVR 326