Pairwise Alignments

Query, 325 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 351 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  118 bits (295), Expect = 2e-31
 Identities = 101/319 (31%), Positives = 147/319 (46%), Gaps = 24/319 (7%)

Query: 5   PTPAQEQA-------ALAWLSLLHDQPSGGDQATFSQWLRADPAHVEAYAQAQVLWELSE 57
           P+PA+  A       AL WL  L    +   QA F  WL A P + EAY +A+ LW  + 
Sbjct: 40  PSPARPDARARAMDEALDWLVRLQCADAADTQA-FEAWLSAAPENAEAYVEAEALW--NG 96

Query: 58  VPARKLADEEALVLQGYLNAMNPSKRSRVARWSGALAMAACLLLMVFMGVGWQPSRWVDD 117
            P  K+A                S R R+      LA AA LL+ +F  VG  P R    
Sbjct: 97  TPLHKVATHMH-------QQQRRSWRGRLRSHWKPLATAALLLVGLFT-VGNLPMR---- 144

Query: 118 FGADYVTAPGEVKTVTLADQSQVTLDADSAIAVDFTQGERHIQLRRGAGFFSVTHTGQ-S 176
             AD++T  GE + + L D ++V L+ +SA A +   G +  +L +G  +F V    Q  
Sbjct: 145 LQADHLTVVGERQRLQLEDGAKVLLNTNSAFASERQDGRQVARLLQGEAYFQVPEGAQLP 204

Query: 177 FVVEAGSGEARVLGTQFEVRLQPAGAEVTVLSGRVGVTPSKQGQQQILTAGQQVAYAEGV 236
             VEAG   A+V  T F VR     A+V V  G V +   ++ Q+  L+AG  ++     
Sbjct: 205 LEVEAGPLRAQVRDTDFAVRYLDGEAQVRVQRGDVDLQ-GERDQRIRLSAGDSISVGPQG 263

Query: 237 ADALHAVDSESRLAWRDGWLNYYKAPLSDVVKDLERYYPGRILLLNKEMGAKRVSGSFPS 296
                  D    LAW DG L +   PLS V+ +++RYYPG I+  N ++    V+G++  
Sbjct: 264 FGQRQRPDMHKDLAWIDGRLVFENCPLSQVLAEVQRYYPGWIINRNAQLEHVAVTGNYRL 323

Query: 297 KDPQAVLNALQAVLGFEQH 315
             P   L AL  +   + H
Sbjct: 324 DQPLETLRALAHITSAQLH 342