Pairwise Alignments

Query, 325 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 311 a.a., transmembrane sensor from Agrobacterium fabrum C58

 Score =  133 bits (334), Expect = 6e-36
 Identities = 95/320 (29%), Positives = 154/320 (48%), Gaps = 18/320 (5%)

Query: 8   AQEQAALAWL-SLLHDQPSGGDQATFSQWLRADPAHVEAYAQAQVLWELSEVPARKLADE 66
           A  + A AW+  +     +  D     +W     AH +A+ Q+  LW       + L   
Sbjct: 8   ALRREATAWIVRITSGTATTEDAEALLRWRSRSDAHEQAFQQSARLW-------KNLGS- 59

Query: 67  EALVLQGYLNAMNPSKRSRVARWSGALAMAACLLLMVFMGVGWQPSRWVDDFGADYVTAP 126
            AL      +A   ++RS +A  +G++A  A  + +V   +G+ PS  VD   ADY T  
Sbjct: 60  -ALGETRKTSASTVTRRSFIA--AGSVAAGAAGVGVVLSELGFLPS--VDAMLADYATGV 114

Query: 127 GEVKTVTLADQSQVTLDADSAIAVDFTQGERHIQLRRGAGFFSVTH-TGQSFVVEAGSGE 185
           GE +TV L D S   LD  + +++D++   RH+ L  GA  F V H   + FVV A +G+
Sbjct: 115 GEQRTVELVDGSTAILDGGTTLSLDYSPSSRHLVLTSGAAVFDVVHDAARPFVVTAANGD 174

Query: 186 ARVLGTQFEVRLQPAGAEVTVLSGRVGVTPSKQGQQQILTAGQQVAYAEGVADALHAVDS 245
               GT F V+       +  L G + V      Q   L  G+ ++Y+        A D 
Sbjct: 175 TTATGTSFSVKHGEEDVSIECLEGHITVQCLGDSQ---LNGGEGISYSRAGLGKKVAADI 231

Query: 246 ESRLAWRDGWLNYYKAPLSDVVKDLERYYPGRILLLNKEMGAKRVSGSFPSKDPQAVLNA 305
           E+  AWR G L +   PL+DVV DL R+  GR+++ + ++ ++R+SG F    P  +L  
Sbjct: 232 ETAAAWRRGLLIFEDRPLADVVSDLNRHRRGRVVIASSDLRSRRMSGVFHLNRPDEILAH 291

Query: 306 LQAVLGFEQHTLLGRMIVVR 325
           L+  L     +L+G ++++R
Sbjct: 292 LEETLQVRPVSLVGGIVLLR 311