Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 172 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score = 82.0 bits (201), Expect = 5e-21
 Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 11/163 (6%)

Query: 21  RAHFLQVFLSQRSQMEALVSRRVGCRATAADLVQDLFLRFWR----RPLVQVEELSTYLL 76
           ++ F  VFL+QR  +   + R V   +TA DL+Q+ +LR  R    RP   ++ L  ++ 
Sbjct: 3   QSRFNHVFLTQRVMLLRTLQRMVNNHSTAEDLLQETYLRVTRALSERP---IDHLEPFVY 59

Query: 77  RCAGNIAIDHLRSEGARARSSEGWLP----EQQDNQGSEPQAALEAGNDLRHVEAALRSL 132
           + A N+A+DHLR+   +AR+ +  +P    +      S P+ A +A   L  +  +L  L
Sbjct: 60  QTARNLALDHLRARRIQARTLQENVPLDVLQSVAAPISTPEDATQAEQMLEALSVSLGQL 119

Query: 133 PERTRQIFLLNRIHGRKYAQIAKAMGLSQSAVEKHMMRALEAC 175
             R ++IF+L+R+HG  Y +IA  +G+S S V+K +   +  C
Sbjct: 120 SARQQRIFILSRLHGCSYQEIADQLGVSLSTVQKELKLIMAIC 162