Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 185 a.a., RNA polymerase sigma factor from Ralstonia solanacearum UW163

 Score = 83.2 bits (204), Expect = 3e-21
 Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 5/162 (3%)

Query: 25  LQVFLSQRSQMEALVSRRVGC-RATAADLVQDLFLRFWRRPLVQ-VEELSTYLLRCAGNI 82
           L   +    ++  L+ RR G  R+ A D+V D+ +     P  Q V   + Y+ R   N+
Sbjct: 22  LAALVRHYDELVDLLRRRFGTDRSVAHDVVHDVCVNLLAEPPRQAVAAPAAYVRRATLNL 81

Query: 83  AIDHLRSEGARAR--SSEGWLPEQQDNQGSEPQAALEAGNDLRHVEAALRSLPERTRQIF 140
           AID  R E  R     S   LPE  D      +  ++AG +L  + AA+  LP R R++F
Sbjct: 82  AIDRHRMESTRGTWVESTADLPEYADETPGHDRQ-VDAGRELDRLSAAIAQLPPRCREVF 140

Query: 141 LLNRIHGRKYAQIAKAMGLSQSAVEKHMMRALEACKASLREP 182
           +L++IH     ++A  +G+S+ AVEKH+ R + AC+ +L  P
Sbjct: 141 VLHKIHDMPQTEVAVRLGISRKAVEKHIRRGMSACRVALDRP 182