Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 82.4 bits (202), Expect = 4e-21
 Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 1/152 (0%)

Query: 28  FLSQRSQMEALVSRRVGCRATAADLVQDLFLRFWRRPLVQVEELSTYLLRCAGNIAIDHL 87
           FL    ++    +R++  R  A DL  D F+R    P  QVE+   YL + A NIA+D  
Sbjct: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPREQVEQPRAYLHQAARNIAVDGF 66

Query: 88  RSEGARARSSEGWLPEQQDNQGSEPQAALEAGNDLRHVEAALRSLPERTRQIFLLNRIHG 147
           R E  R         E     G +P+A + A      VE AL  LP   RQ+F+  ++ G
Sbjct: 67  RREDRRQALEREAFEEGATGSG-DPEAYVHALELADSVERALAELPLNCRQVFIWQKLEG 125

Query: 148 RKYAQIAKAMGLSQSAVEKHMMRALEACKASL 179
              A+IA+ MGLS++ VEK+M+R L   +  L
Sbjct: 126 LTQAEIAERMGLSKNMVEKYMIRTLRHLREHL 157