Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 194 a.a., RNA polymerase sigma factor from Pseudomonas sp. SVBP6

 Score =  269 bits (688), Expect = 2e-77
 Identities = 139/179 (77%), Positives = 155/179 (86%), Gaps = 1/179 (0%)

Query: 15  ADAAGGRAHFLQVFLSQRSQMEALVSRRVGCRATAADLVQDLFLRFWRRPLVQVEELSTY 74
           AD A GRA F+QVFL+QR+QMEALVSRR+GCRATA+DL+Q+LFLRFWRRP V+VE L TY
Sbjct: 16  ADGASGRARFVQVFLAQRAQMEALVSRRIGCRATASDLIQELFLRFWRRPQVKVEALDTY 75

Query: 75  LLRCAGNIAIDHLRSEGARARSSEGWLPEQQDNQGSEPQAALEAGNDLRHVEAALRSLPE 134
           LLRCAGNIAIDHLRSEGAR R ++    E  D+  SEPQAALEA +DL+ +EAALR LPE
Sbjct: 76  LLRCAGNIAIDHLRSEGARERVTDSLQLEVADDHVSEPQAALEANSDLQRIEAALRELPE 135

Query: 135 RTRQIFLLNRIHGRKYAQIAKAMGLSQSAVEKHMMRALEACKASLREPS-SPRTPGKAP 192
           RTRQIFLLNRIHG KYA+IAKAMGLSQSAVEKHMMRALEACKAS+  PS SPR PGKAP
Sbjct: 136 RTRQIFLLNRIHGCKYAEIAKAMGLSQSAVEKHMMRALEACKASVALPSASPRKPGKAP 194