Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 159 a.a., putative RNA polymerase sigma factor FecI from Pseudomonas sp. RS175

 Score = 77.0 bits (188), Expect = 2e-19
 Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 34  QMEALVSRRVGCRATAADLVQDLFLRFWRRPL-VQVEELSTYLLRCAGNIAIDHLRSEGA 92
           ++   ++ R+G R  A D+V D ++R   R     +E+   +L R A N+ ID  R    
Sbjct: 7   ELVCFLNARLGNRQAAEDVVHDAYVRVLERASDTPIEQPRAFLYRTALNLVIDGHRRNTL 66

Query: 93  RARSSEGWLPEQQDNQGSEPQAALEAGNDLRHVEAALRSLPERTRQIFLLNRIHGRKYAQ 152
           R   S   L  ++      P  +L+ G  L  ++ AL  LP   R+ FLL ++ G  + Q
Sbjct: 67  RQVESLDVLDSEERFFTPSPHTSLDHGQRLDMLQRALAELPPLCRESFLLRKLEGLSHPQ 126

Query: 153 IAKAMGLSQSAVEKHMMRALEACKASLRE 181
           IA+ +G+S++ VEKH++ A++ C+  +R+
Sbjct: 127 IAERLGISRALVEKHIVNAMKHCRIRVRQ 155