Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 206 a.a., sigma-70 family RNA polymerase sigma factor from Mucilaginibacter yixingensis YX-36 DSM 26809

 Score = 71.6 bits (174), Expect = 9e-18
 Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 5/163 (3%)

Query: 19  GGRAHFLQVFLSQRSQMEALVSRRVGCRATAADLVQDLFLRFW--RRPLVQVEELSTYLL 76
           G    F  V+ +  S++   +  R      A ++VQ  F++FW  R+ +     +   L 
Sbjct: 11  GNLDEFRLVYAAYHSKLYHFIFSRTQSEYIAQEVVQLTFIKFWERRQHISNDYTIDIQLF 70

Query: 77  RCAGNIAIDHLRSEGARARSSEGWLPEQQDNQGSEPQAALEAGNDLRHVEAALRSLPERT 136
           R A  + ID LR E  R R ++  L      +  +   A E  ++L+HV AA+  LP   
Sbjct: 71  RIARTVLIDELRKERTRQRHND--LASAGTEEAFDLMRA-EGKDELKHVFAAIEDLPPVR 127

Query: 137 RQIFLLNRIHGRKYAQIAKAMGLSQSAVEKHMMRALEACKASL 179
           +++F L+RI+G  Y  IA  M LS   VE H+ RA++  + ++
Sbjct: 128 KKVFKLSRINGLPYKDIAAIMSLSPKTVENHISRAIKQLRNAI 170