Pairwise Alignments

Query, 552 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 554 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  339 bits (869), Expect = 2e-97
 Identities = 204/553 (36%), Positives = 317/553 (57%), Gaps = 14/553 (2%)

Query: 2   LTLLNLLSAVTLLIWGTHIVRTGILRVYGSNLRQVIGQNMSKRWLAFIAGILVTAMVQSS 61
           +TLL+L     LL+WG H+V++G++R  G  LR V+G  ++     F AG +VT ++QSS
Sbjct: 5   VTLLDLAGFAALLLWGIHMVQSGVMRALGPRLRMVLGHALAGPLRGFCAGAVVTTLLQSS 64

Query: 62  NATAMLVTSFVGQGLMGLMPALATMLGADVGTALMARVLTFDLSWLSPLLIFLGVIFFLS 121
            ATA++V+SF   GL+ L+PALA MLGA++GT+L+ + L+F+++ L+P     G+I F  
Sbjct: 65  TATALMVSSFTAVGLVALVPALAAMLGANIGTSLIVQALSFNVAALAPAAFLGGLILFRR 124

Query: 122 RKQTRAGQLGRVGIGLGLIILALQLIVEAAGPITHAQGVKVLFASLTGDILLDALVGALF 181
              T     GRV IGLGLI+LAL  +V+   P+  A  +++L  ++    LLD ++ A+ 
Sbjct: 125 GAGTSMRDFGRVLIGLGLIVLALHALVDLLRPLEDAPSIRMLLGAIATVPLLDVMLAAIL 184

Query: 182 AMISYSSLAAVLLTATLAGAGVIGLHVAIGLVIGANIGSGVLAFL-STSMQNAAGRQVAL 240
               +SS+A VL+TA+LA  GV+  + AI LV+GAN GS +   + +    + A  ++ +
Sbjct: 185 TWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANFGSAIAPVVDAMGKDDPAAMRLPM 244

Query: 241 GSLLYKLIGLLLIIPVLDP----LVLWMDGLDYSAQGMVITFHLLYNVTRCLILLPTIGP 296
           G+++ + +G+ L +  ++P    +VLW   L      + + FH L+N+   L+ LP +GP
Sbjct: 245 GNMINRAVGVALGVAFIEPVGRQMVLWQPDL----ARVAVDFHTLFNIVTALVFLPLLGP 300

Query: 297 MARLCAWLLPEREETNGKAKPRHLDLAALATPSLALANAARETLRLGDLIDNML-TAMQE 355
            ARL  WL P RE  +   +PR+L  A   TP +AL  A RE +RL D ++ ML TA + 
Sbjct: 301 FARLLEWLYPGRELADDPTRPRYLAPAVSETPVVALGAATREAMRLADALEEMLDTASRA 360

Query: 356 VLRGKQTAITQEMRSLSDDVESLYSAIKLYLAQMPREDLSEQDSRRWAEIIELSINLKLA 415
           +L G +  I  E R   D ++ L   I+ YLA +  +DLS  D RR  EI+  S NL+ A
Sbjct: 361 LLDGARRHIA-ETRHGDDVLDRLNREIRAYLAMLDPDDLSLADRRRVEEILTFSANLEQA 419

Query: 416 GDLIERMLRKVQQQKTSQRRQFSEVGLEELTGLHGQLIANLRLGLSVFLSADPESARQLL 475
            D++   L     ++  +   FS     E++ L  +L AN+RL  S+F++ADP +AR L 
Sbjct: 420 ADVVCGRLMAEAGKRLKRGIAFSTTEEREISALIERLKANVRLAASLFMTADPRAARLLA 479

Query: 476 REKRRFRAQERRLAHAHVSRLQRKIVQSLETSSLHLELIADMKRLNS-LFCSSAYVVLET 534
            EK  FR  E   A  H  RL+  +    E S L  +++ D+K +NS +  ++AY VL  
Sbjct: 480 LEKAAFRESETTAARLHFDRLRHGLAAQAEASGLSADIVRDLKLVNSHVVAAAAYPVLAR 539

Query: 535 SDTGALSAEDIAD 547
           S  G L    +AD
Sbjct: 540 S--GELRETRLAD 550