Pairwise Alignments

Query, 162 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 171 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  169 bits (429), Expect = 2e-47
 Identities = 84/150 (56%), Positives = 111/150 (74%)

Query: 10  LYNDHHHWLTGWLRRKLGCPESAADLAQDTFMRVLTAREAPTLIEPRAFLTTVAKRVLFN 69
           LY+ HH WL GWL R+ GC E AADLAQ+TF+R+L AR   TL +PRA+L+++A+ ++ +
Sbjct: 15  LYHAHHAWLRGWLSRRTGCREHAADLAQETFVRLLNARRQQTLQQPRAYLSSIARSLMID 74

Query: 70  FYRRQDLERAYLDALAQMPEHVAPSEEERAIILQTLVELDQLLDGLPVQVKRAFLLAQCD 129
            YRR++LERAYL++LA  P+   PSEE R +IL +L  +D+LLD L  +V+ AFLLAQ D
Sbjct: 75  QYRRRELERAYLESLAHFPQVEVPSEETRLLILDSLERIDRLLDQLKPRVREAFLLAQLD 134

Query: 130 GLTYAQIGAELGISIATVKRHLSKAAMRCY 159
           GLT AQI   LG+S ATV+R LSKA   CY
Sbjct: 135 GLTCAQIALRLGVSKATVERDLSKALHACY 164