Pairwise Alignments

Query, 162 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 169 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  157 bits (398), Expect = 6e-44
 Identities = 71/153 (46%), Positives = 116/153 (75%)

Query: 7   VEVLYNDHHHWLTGWLRRKLGCPESAADLAQDTFMRVLTAREAPTLIEPRAFLTTVAKRV 66
           + +LY DHH WL GWLRR+LG  E AAD+AQDTF+R+L +   P   E R++L  +A+ +
Sbjct: 11  LHLLYRDHHGWLQGWLRRRLGDREHAADVAQDTFLRLLVSGRFPGDKESRSYLAQIARNL 70

Query: 67  LFNFYRRQDLERAYLDALAQMPEHVAPSEEERAIILQTLVELDQLLDGLPVQVKRAFLLA 126
           + + +RR  +ERAYL+++A +PE  +PS E RA+IL+TL+++D +LD +P  V++AFLL+
Sbjct: 71  VIDQWRRLRIERAYLESIAHLPEPESPSLETRALILETLMQIDAMLDRMPDNVRQAFLLS 130

Query: 127 QCDGLTYAQIGAELGISIATVKRHLSKAAMRCY 159
           Q +GL+YAQI   LG+++++V++++++A + CY
Sbjct: 131 QFEGLSYAQIAERLGVTVSSVQKYMTRAIVACY 163