Pairwise Alignments

Query, 162 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  164 bits (416), Expect = 5e-46
 Identities = 80/156 (51%), Positives = 111/156 (71%)

Query: 4   PNTVEVLYNDHHHWLTGWLRRKLGCPESAADLAQDTFMRVLTAREAPTLIEPRAFLTTVA 63
           P  V +LY  HH WL GWLR ++GC E AADLAQDTF+R+L AR+   L EPRA+L+++A
Sbjct: 9   PTEVALLYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIA 68

Query: 64  KRVLFNFYRRQDLERAYLDALAQMPEHVAPSEEERAIILQTLVELDQLLDGLPVQVKRAF 123
           + ++ + +RR+ LERAY + LA +PE   PSEE++ +IL +L  LD+ L  L  +V++AF
Sbjct: 69  RGLMIDQFRRRALERAYQEGLAHLPEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAF 128

Query: 124 LLAQCDGLTYAQIGAELGISIATVKRHLSKAAMRCY 159
           LLAQ DGL+  Q+   LG+S ATV+R L+KA   CY
Sbjct: 129 LLAQLDGLSIVQVAQRLGVSRATVERDLAKALGACY 164