Pairwise Alignments

Query, 313 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

 Score =  100 bits (248), Expect = 6e-26
 Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 26/286 (9%)

Query: 1   MNFSTQ---VAEQAVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQRVNQRLRG 57
           M+FS     +  QA  W V +  G        A+++W+   + H +AW  + R    L  
Sbjct: 4   MSFSDSESLLQRQAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREVMRTWSALDP 63

Query: 58  M-PSPLAHAALNAPTSTSRRQALKLLL-------ILGAGSAAAWSLRQQHILPPL----- 104
           +     A  A  A T + R  +  L L        LG   AA+ +     + PPL     
Sbjct: 64  LLAEEAARQASRAGTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDPPLGLWPS 123

Query: 105 ----TADYRSPVGQRRKVQLADGSQLQLNTGSAVD-VHFDGRQRLIRLLEGEILLTGHAA 159
               TADYR+  G++R+V LA G  +++NT + ++ +  D   R + L+ GE  +  + A
Sbjct: 124 VGDLTADYRTATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGEAEIAANGA 183

Query: 160 GTPLQVLTGQGLLTSQAARMNVRQFNDHTQLAVLDGRVEVMPTTYSGLPLAVDATRQVNF 219
              L V TG G L +++AR N+R       +  LDGR+ V   + +G   A++A RQV F
Sbjct: 184 SDFL-VETGGGRLVARSARFNIRHTGPQVCVTCLDGRLTV---SVNGEQRALEAGRQVTF 239

Query: 220 TRKG-WDTPRPTDANSGAWADGMLVAAHMRLEDFLGELGRYRRGQV 264
            R G  +  R  +A+   W  G+L    M L + + E+ RYR G+V
Sbjct: 240 DRAGLQEVVRADEASVSTWRTGVLSFDRMPLAEVIDEINRYRPGKV 285