Pairwise Alignments

Query, 313 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 330 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

 Score =  194 bits (494), Expect = 2e-54
 Identities = 117/315 (37%), Positives = 172/315 (54%), Gaps = 13/315 (4%)

Query: 7   VAEQAVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQRVNQRLRGMPSPLAHAA 66
           V  +A  WLV +  G     +Q A  +W +A   H++AW   +R++++   +P+ +    
Sbjct: 14  VLREAARWLVRLHSGDAGKAEQDACLRWRSADPAHEQAWQRAERLSRKFGAVPATVGMPV 73

Query: 67  LNAPTSTSRRQALKLLLILGAGSAAAWSLRQQHILPPLTADYRSPVGQRRKVQLADGSQL 126
           L     T+RR A++ L +L   + AA+   +        +D R+  G+RR+V+LADGS++
Sbjct: 74  LARQARTNRRAAMRTLALLATVAPAAYLGWRHAPWQAWASDERTATGERREVKLADGSRM 133

Query: 127 QLNTGSAVDVHFDGRQRLIRLLEGEILL-------TGHAAGTPLQVLTGQGLLTSQAARM 179
            L+T SAVD+ FDGRQR IRL  G I +       TG   G P  V T QG L +   R 
Sbjct: 134 LLDTASAVDIRFDGRQRTIRLRAGAISIVTAPDPQTGER-GRPFVVETVQGRLRALGTRF 192

Query: 180 NVRQFNDH-----TQLAVLDGRVEVMPTTYSGLPLAVDATRQVNFTRKGWDTPRPTDANS 234
            VRQ  D       ++AV +G VE+     +   L + A +Q   T +G    +P D  S
Sbjct: 193 TVRQEGDAQDGGPVRVAVTEGAVEITLRDATAPALVLPAGQQTVLTAEGAAARQPVDPQS 252

Query: 235 GAWADGMLVAAHMRLEDFLGELGRYRRGQVNCDPQVANLLISGSYPLDDSERILDLLEVS 294
             W  G+L A +MRL DF  EL RYR G V C P+VA L ISG++ L+D++ +L +L  +
Sbjct: 253 QGWIQGVLYADNMRLADFCAELARYRPGIVRCAPEVAGLRISGAFQLNDTDYVLAMLATT 312

Query: 295 LPVKVRRFTRYWVTV 309
           LPV+V   TRYWV+V
Sbjct: 313 LPVQVVTRTRYWVSV 327