Pairwise Alignments

Query, 313 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 314 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  143 bits (360), Expect = 6e-39
 Identities = 99/303 (32%), Positives = 155/303 (51%), Gaps = 8/303 (2%)

Query: 11  AVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQRVNQRLRGMPSPLAHAALNAP 70
           A  WL  +  G  +        QW  +   H+ AW     +  R  G+P  LA AAL+ P
Sbjct: 15  AARWLALLDSGDASESDLQRLAQWRASSHLHEDAWQKASLLRARFAGLPGALAMAALDRP 74

Query: 71  TSTSRRQALKLLLILGAGSAAAWSLRQQHILPPLTADYRSPVGQRRKVQLADGSQLQLNT 130
            +  RR  LK  L + A    AW + ++  L   TAD R+ VG+RR+  L+DG+ LQLNT
Sbjct: 75  DA-GRRALLKQALGVTALLPVAWLVSRELPLDAWTADMRTAVGERRQALLSDGTLLQLNT 133

Query: 131 GSAVDVHFDGRQRLIRLLEGEILLTGHA-AGTPLQVLTGQGLLTSQAARMNVRQFNDHTQ 189
            SAVD+     +  + LL GE+ ++  A     LQV  G+ +L+   A +  R  ++  +
Sbjct: 134 DSAVDIELGAGR--VALLRGEVAVSVPANLSLTLQVPYGRVVLSEGEACL--RLLDEACR 189

Query: 190 LAVLDGRVEVMPTTYSGLPLAVDATRQVNFTRKGWDTPRPTDANSGAWADGMLVAAHMRL 249
           ++ + G V + P    G  + +   +Q +    G    +  DA    W +G L      L
Sbjct: 190 VSAIKGAVSLQPLR--GPAVMLQDGQQASLQAAGVGPVKAFDAWQLGWREGALRLDDRPL 247

Query: 250 EDFLGELGRYRRGQVNCDPQVANLLISGSYPLDDSERILDLLEVSLPVKVRRFTRYWVTV 309
            + L EL RYR G +   P++  L ++G++ LDD++R+L LL  SLP++V+  TRYWV++
Sbjct: 248 GELLHELRRYRPGVLRWAPELERLRVTGTFRLDDTDRVLALLAASLPLQVQTRTRYWVSL 307

Query: 310 QAR 312
            AR
Sbjct: 308 TAR 310