Pairwise Alignments

Query, 313 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  191 bits (485), Expect = 2e-53
 Identities = 119/313 (38%), Positives = 163/313 (52%), Gaps = 19/313 (6%)

Query: 10  QAVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQRVNQRLRGMPSPLAHAALNA 69
           +A  WLV++Q G        A Q W    ++H +AW   + +    R +P+P+    L  
Sbjct: 13  EAADWLVQLQSGTATEADHRAVQAWCKRSAQHAQAWQRAEAILGDFRRLPTPVTGETLRR 72

Query: 70  PT---STSRRQALKLLLILGAGSAAAWSLRQQHILPPLTADYRSPVGQRRKVQLADGSQL 126
            +   + SRRQAL  L +    + AAW   ++      TAD  + VG++R + LADGSQ+
Sbjct: 73  LSRNGAVSRRQALHRLGLWLLAAPAAWLAWRETPWQQWTADAHTAVGEQRTLTLADGSQV 132

Query: 127 QLNTGSAVDVHFDGRQRLIRLLEGEILLTGH----AAGTPLQVLTGQGLLTSQAARMNVR 182
            LNT +A+D+ FD RQR I LL GEILLT          PL V T  G  T++  R +VR
Sbjct: 133 LLNTDTAIDITFDARQRRIDLLAGEILLTSAKDPATPARPLSVRTPHGQATARGTRFSVR 192

Query: 183 QFNDHTQLAVLDGRVEVMPTTYSGLPLAVDATRQVNFTRKGWDTPR-----PTDANSGAW 237
                TQ+AVL+G V+  P     L L           R  +D  R     P +    AW
Sbjct: 193 IHGPLTQVAVLEGAVDTRPLHADSLLLKAGE-------RSAFDGDRVLPASPLETGDLAW 245

Query: 238 ADGMLVAAHMRLEDFLGELGRYRRGQVNCDPQVANLLISGSYPLDDSERILDLLEVSLPV 297
             GML+A  MRL D L EL RYR G + C P V  L +SG++PL D++  L LL  +LPV
Sbjct: 246 EHGMLLARDMRLADLLQELARYRPGVLRCHPAVRELKVSGAFPLADTDASLRLLSDTLPV 305

Query: 298 KVRRFTRYWVTVQ 310
            ++  TRYWVTV+
Sbjct: 306 NIQGMTRYWVTVE 318