Pairwise Alignments

Query, 313 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 316 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  198 bits (504), Expect = 1e-55
 Identities = 114/306 (37%), Positives = 170/306 (55%), Gaps = 5/306 (1%)

Query: 9   EQAVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQRVNQRLRGMPSPLAHAALN 68
           +QA+ WLV+++    +PR +  +Q WL +H  ++ AW  +  +   L G+P  L+   L+
Sbjct: 12  DQAIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAWQRVSNLGDELAGLPKDLSRRTLD 71

Query: 69  APT--STSRRQALKLLLILGAGSAAAWSLRQQHILPPLTADYRSPVGQRRKVQLADGSQL 126
           A      SRR  LKLL +L  G +  W+ R+   LP L AD  +  G+RR+ Q +DGS+L
Sbjct: 72  ASQHPKASRRDHLKLLGLLAVGGSLGWAAREPLGLPQLLADTSTATGERRQWQGSDGSRL 131

Query: 127 QLNTGSAVDVHFDGRQRLIRLLEGEILLTGHAAGT-PLQVLTGQGLLTSQAARMNVRQFN 185
           QLNT SA+D+H+   QR ++L+ GE+ L  +     P  V T  G LT+   ++ +R+ +
Sbjct: 132 QLNTASAIDLHYSAEQRQLKLIHGEVSLESNPNDNRPFHVATRVGPLTTFDGQLLLRENS 191

Query: 186 DHTQLAVLDGRVEVMPTTYSGLPLAVDATRQVNFTRKGWDTPRPTDANSGAWADGMLVAA 245
               L+V  G V + P + S   +    T QV  T  G    R    +   W +G+L   
Sbjct: 192 QGLLLSVRRGEVTLFPASASARQVLPGETLQV--TADGSIQARTLHNDPWGWTEGVLSVQ 249

Query: 246 HMRLEDFLGELGRYRRGQVNCDPQVANLLISGSYPLDDSERILDLLEVSLPVKVRRFTRY 305
            M L +F  ELGRYR G + C P+VA L +SG+Y L D+ +IL LL  SLPV+V   TRY
Sbjct: 250 QMPLAEFASELGRYRPGLLRCAPEVAGLKVSGTYQLADTGQILQLLTRSLPVRVEYRTRY 309

Query: 306 WVTVQA 311
           WV++ A
Sbjct: 310 WVSIGA 315