Pairwise Alignments

Query, 505 a.a., chromosomal replication initiation protein from Pseudomonas simiae WCS417

Subject, 459 a.a., Chromosomal replication initiator protein DnaA from Variovorax sp. SCN45

 Score =  437 bits (1123), Expect = e-127
 Identities = 234/502 (46%), Positives = 318/502 (63%), Gaps = 57/502 (11%)

Query: 5   LWQQCVELLREELPAQQFNTWIRPLQVEAEGD--ELRVYAPNRFVLDWVNEKYLSRVLEL 62
           LWQ CV+ L +EL  QQFNTWI+PL  +   D   + V+  NRF LDW+  +Y  ++  +
Sbjct: 10  LWQACVDQLAQELSEQQFNTWIKPLTAQVADDLSRMTVFVANRFKLDWIRAQYAGKIAAM 69

Query: 63  LDE-HGNGLAPVLSLLIGSKRSSAPRAAPNAPLAAAASQAQAAAAPAVSAPSPAPAPSKS 121
            ++ +G  +A  L+L        APR  P          A  A       P     P   
Sbjct: 70  AEKMYGQPVAIELAL--------APRETP-------VRSAPVAVMTETDVPRDVAGPG-- 112

Query: 122 SAQKNAPENEEPSRDSFDPMAGAASQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENFVE 181
                    EEP+   F                             + LN   TF+  VE
Sbjct: 113 ---------EEPAAAGFK----------------------------NRLNSGLTFDTLVE 135

Query: 182 GKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHS 241
           G +N++ARAAA  VA  P H YNPLF+YGGVGLGKTHLMHAVGN LL    ++KV+Y+H+
Sbjct: 136 GTANRMARAAAMHVAGMPGHLYNPLFIYGGVGLGKTHLMHAVGNRLLADRADSKVLYIHA 195

Query: 242 ERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQ 301
           E+FV+D+VKA Q    +EFK  Y S+D LLIDD+QFFA K+R+QEEFF+ F ALL     
Sbjct: 196 EQFVSDVVKAYQRKTFDEFKERYHSLDLLLIDDVQFFANKDRTQEEFFNAFEALLAKKSH 255

Query: 302 VILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAF 361
           +++TSD YPK +  + ERL SRF  GLTVA+EPPELE RVAIL+ KA     ++P + AF
Sbjct: 256 IVMTSDTYPKGLADIHERLVSRFDSGLTVAIEPPELEMRVAILINKARAESAEMPEEVAF 315

Query: 362 FIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTV 421
           F+A+ +RSNVRELEGAL++++A+S F  ++I+I L RE+L+DLL++Q++ +SV+NIQ+TV
Sbjct: 316 FVAKNVRSNVRELEGALRKILAYSRFNQKEISIALAREALRDLLSIQNRQISVENIQKTV 375

Query: 422 AEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRK 481
           A+YYKIK++D+ SK+R  S+ARPRQ+AM L+KELT  SLPEIG++FGGRDHTTVLHA RK
Sbjct: 376 ADYYKIKVADMYSKKRPASIARPRQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRK 435

Query: 482 INELKESDADIREDYKNLLRTL 503
           I+  ++   ++ +    L +TL
Sbjct: 436 ISGERQQLTELNQQLHVLEQTL 457