Pairwise Alignments

Query, 505 a.a., chromosomal replication initiation protein from Pseudomonas simiae WCS417

Subject, 228 a.a., DnaA regulatory inactivator Hda from Variovorax sp. OAS795

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 21/203 (10%)

Query: 201 HGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEF 260
           H   P +L+G  G GKTHL+ +V   +  +   A V +LH+               + E 
Sbjct: 44  HSPVPTYLWGESGSGKTHLLESV--RVALREQGASVGWLHA--------------GLLEP 87

Query: 261 KRFYRSVDALLIDDIQFFARKERSQEEFFHTF-NALLEGGQQVILTSDRYPKEIEGLEER 319
             F     A+L+DD+  +   +  Q   F+ F NA  +  Q+ ++ +   P     L E 
Sbjct: 88  PEFDERWGAVLLDDVHLYTAVQ--QHAAFNWFVNA--QSLQRGVVAAGALPPADLPLRED 143

Query: 320 LKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAFFIAQRIRSNVRELEGALK 379
           L++R GWG    ++      R A+L + AD   V L  D   F+  R   ++  L   L 
Sbjct: 144 LRTRLGWGHVFHLQVLSESERRAVLRQAADARGVMLSDDVLDFMLHRFSRDLGSLMELLT 203

Query: 380 RVIAHSHFMGRDITIELIRESLK 402
           ++  ++    R ITI LIR  L+
Sbjct: 204 QLDGYALQTQRAITIPLIRSMLE 226