Pairwise Alignments

Query, 380 a.a., Outer membrane beta-barrel assembly protein BamB from Variovorax sp. SCN45

Subject, 595 a.a., quinoprotein ethanol dehydrogenase from Pseudomonas putida KT2440

 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 53/273 (19%)

Query: 67  INGDIVTVAGSDGTVVAIDARAGRETWRASAGTP---------LAAGVGSDGSLAAVVTT 117
           I   ++ + GS   V A+DAR G++ W+  A  P         +  GV   G+L    T 
Sbjct: 92  IKDGVMYLTGSYSRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGNLVFFGTL 151

Query: 118 GNELVAL--ENGKVLWKQKLS-----AQAFTAPLVAGRRVFVQTAD------RSVSAWDG 164
             +LVAL  + GKV+W +K++          AP++   ++    A         + A++ 
Sbjct: 152 DAKLVALNKDTGKVVWSKKVADHKEGYSISAAPMIVNGKLITGVAGGEFGVVGKIQAYNP 211

Query: 165 QSGRRLWIQQRAGENLVLRKSGVLIAVGDTLVAGLGGRLVGIN-PGNGTSRWEAPIAAP- 222
           ++G  LW++     ++     G +   G  +  G+ G   G   PG+    W+   AAP 
Sbjct: 212 ENGELLWMRPTVEGHM-----GYVYKDGKAIENGISGGEAGKTWPGD---LWKTGGAAPW 263

Query: 223 -RGTNDVERLVDLTG--------SVSRVGDSVCARAYYASVGCVDTARGTLAW---SKPA 270
             G  D E  + L G        S  R GD++    Y +S   ++   GT+ W   S P 
Sbjct: 264 LGGYYDPETNLILFGTGNPAPWNSHLRPGDNL----YSSSRLALNPDDGTIKWHFQSTPH 319

Query: 271 SG--ADGVSGDDRFVY---GTESDGSVIAWRRG 298
            G   DGV+    F Y   G E   +  A R G
Sbjct: 320 DGWDFDGVNELISFNYKDGGKEVKAAATADRNG 352



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 79  GTVVAIDARAGRETWRASAGTPLAAGV-GSDGSLAAVVTTGNELVAL--ENGKVLWKQKL 135
           G + AID  +G+E WR     PL  GV  + G+L    T    L A   + G  +W+ + 
Sbjct: 470 GVLRAIDPVSGKEVWRHKNYAPLWGGVLTTKGNLVFTGTPEGFLQAFNAKTGDKVWEFQT 529

Query: 136 SAQAFTAPL 144
            +    +P+
Sbjct: 530 GSGVLGSPV 538



 Score = 25.0 bits (53), Expect = 0.006
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 15/157 (9%)

Query: 143 PLVAGRRVFVQTADRSVSAWDGQSGRRLW-IQQRAGENL-----VLRKSGVLIAVGDTLV 196
           PL+    +++  +   V A D ++G++LW    R  +++     V+ + GV +       
Sbjct: 90  PLIKDGVMYLTGSYSRVFAVDARTGKKLWQYDARLPDDIRPCCDVINR-GVALYGNLVFF 148

Query: 197 AGLGGRLVGINPGNGTSRWEAPIAAPRGTNDVERLVDLTGSVSRVGDSVCARAYYASVGC 256
             L  +LV +N   G   W   +A  +    +     +       G +         +  
Sbjct: 149 GTLDAKLVALNKDTGKVVWSKKVADHKEGYSISAAPMIVNGKLITGVAGGEFGVVGKIQA 208

Query: 257 VDTARGTLAWSKPASGADGVSGDDRFVYGTESDGSVI 293
            +   G L W +P      V G   +VY    DG  I
Sbjct: 209 YNPENGELLWMRPT-----VEGHMGYVY---KDGKAI 237