Pairwise Alignments

Query, 284 a.a., Type IV pilus biogenesis protein PilF from Variovorax sp. SCN45

Subject, 255 a.a., Type IV pili biogenesis protein PilF from Pseudomonas putida KT2440

 Score =  107 bits (268), Expect = 2e-28
 Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 23/272 (8%)

Query: 6   PMTTASAQRMLAASFAGVAVTFLLAGCVSTRTTTTSLADTSSGKGVDIVTESDESSRQRR 65
           PM+  +A  +LA S        LLAGCVS             G   D +  +    R   
Sbjct: 2   PMSLRAALSILALS--------LLAGCVS-------------GGASDPL--ASRQGRVEA 38

Query: 66  ARLRMELASGYFEQGQTNVALDEIKQALAADPNNSDAYNLRGLVYMRLDDAGMAEDSFRR 125
            R  ++L  GY +QG T  A   + +ALA D  + DA+    +V+    +  +AE  FR+
Sbjct: 39  GRAYVQLGLGYLQQGLTEQAKAPLGKALALDDQDVDAHAALAVVFQAQGEPALAEAHFRK 98

Query: 126 AIAINPRDPNTRHNYGWLLCQQNRYGDAATQFNEALAVPSYADRAKTLMTRGVCELKAGQ 185
           A+ I+  D   R+NYG  L  Q R+ +A   F  A A   Y +R++     G+  LK  +
Sbjct: 99  ALLISRGDTRIRNNYGSFLYAQGRFAEAKQMFRLASADTLYPERSRVYENLGLTALKLER 158

Query: 186 RAQAERTLQQAYEIDASNPVVGFNLALVLAQREEWSRAQFYIRRVNNSPSASAETLWLGI 245
           R QA   L +A +++   P     +A +  +   +  A+ Y  R +      A +L LG 
Sbjct: 159 RDQAHAYLLKALQLNQRQPKALLEMAELSYENRHYVPARDYYDRFSQLSDHDARSLLLGS 218

Query: 246 KIERKLNNREALAQLGGQLQRRFPQSREASAY 277
           ++ R  + +  LA+LG QLQR +P + E   Y
Sbjct: 219 RLARVFDEQGTLAELGQQLQRLYPGTPEYQQY 250