Pairwise Alignments

Query, 599 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 210 a.a., 23S rRNA pseudouridine 2457 synthase from Pseudomonas putida KT2440

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 23/196 (11%)

Query: 247 PIRYRIAPPP-PRVIAYHKPTGEVVTHDDPQNRPTV--FRKLPRLQQGKWQSVGRLDLNT 303
           P R   APP  PR+I ++KP   +    D + R T+  F  +P +        GRLD ++
Sbjct: 20  PRRQAKAPPAEPRLILFNKPFDVLTQFSDGEGRATLKDFIDIPGVYPA-----GRLDRDS 74

Query: 304 EGLLLFSSSGDLANQLMHPRFGLEREYAVRVLGALTSEEKQKLLDGVRLDDG---MAQFG 360
           EGLLL ++ G L  ++  P+  L + Y V+V G  + E+ Q+L DGV L+DG    A+  
Sbjct: 75  EGLLLLTNDGGLQARIADPKHKLAKTYWVQVEGEPSDEQLQRLRDGVELNDGPTLPAEAR 134

Query: 361 TIEDGGGEGSN-----------CWYRVTISEGRNREVRRLFESVGHAVSRLIRIRYGAMV 409
            +E+      N            W  + I EGRNR+VRR+  +VG    RL+R+R G   
Sbjct: 135 RLEEPELWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWA 194

Query: 410 LPRGLKRGAWMELDER 425
           L  GL++G W E+  R
Sbjct: 195 LD-GLEQGCWREVPAR 209