Pairwise Alignments

Query, 599 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 348 a.a., rRNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  151 bits (381), Expect = 5e-41
 Identities = 104/265 (39%), Positives = 152/265 (57%), Gaps = 17/265 (6%)

Query: 192 EADSPKLHKVLAQAGLGSRLEMEQLILQGRISVN----NEPAHIGQRIQYGDQVKINGKP 247
           +++  ++ K LA+AGL SR E E+ I  GR++VN    + PA +   +  GD V ++G P
Sbjct: 48  KSEGERIAKRLARAGLCSRREAERWIEDGRVTVNGHRLSSPACV---VGPGDIVIVDGIP 104

Query: 248 IRYRIAPPPPRVIAYHKPTGEVVTHDDPQNRPTVFRKLPRLQQGKWQSVGRLDLNTEGLL 307
           +     P   R+  YHKP G V TH DP+ RPTVF  LP     +  SVGRLDLN+EGLL
Sbjct: 105 LS---EPEKTRLWRYHKPAGLVTTHKDPEGRPTVFDHLPE-GMPRVISVGRLDLNSEGLL 160

Query: 308 LFSSSGDLANQLMHPRFGLEREYAVRVLGALTSEEKQKLLDGVRLDDGMAQFGTIED--G 365
           L ++ G+LA +L  P     R Y VRV G ++ +   +L +G+ + DGMA +G I     
Sbjct: 161 LLTNDGELARKLELPSNAWLRRYRVRVHGEVSEDALARLENGITI-DGMA-YGPISATLD 218

Query: 366 GGEGSNCWYRVTISEGRNREVRRLFESVGHAVSRLIRIRYGAMVLPRGLKRGAWMELDER 425
             +G+N W  V++ EG+NRE+RR+ E +G  VSRLIR+ YG   L   L+ GA  E+  +
Sbjct: 219 RRQGANAWLSVSLREGKNREIRRVMEYLGWPVSRLIRVSYGPFQLGT-LEEGAADEVAGK 277

Query: 426 DIRALFQASGGAAARPGPQQRGPGQ 450
            +R      G A  +P  + +  G+
Sbjct: 278 VLREQ-MGEGKAVLKPKAETKSAGE 301