Pairwise Alignments

Query, 599 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 235 a.a., Ribosomal small subunit pseudouridine synthase A from Acinetobacter radioresistens SK82

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 14/234 (5%)

Query: 198 LHKVLAQAGLGSRLEMEQLILQGRISVNNEP-AHIGQRIQYGD-QVKINGKPIRYRIAPP 255
           L K+L   G GSR   +QLI  G IS+N+E  A    +    +   +++G+   YR    
Sbjct: 3   LEKILQSQGFGSRKYCQQLIKSGAISINHEICADTKAKFDLKNFTFEVHGEEFEYR---- 58

Query: 256 PPRVIAYHKPTGEVVTHDDPQNRPTVFRKL-PRLQQGKWQSVGRLDLNTEGLLLFSSSGD 314
               IA +KP G   +H   Q   +VF    P L     Q VGRLD +T GLLL +  G 
Sbjct: 59  EKVYIALNKPQGYECSHQ-AQYHFSVFDLFDPALLNRGIQCVGRLDQDTTGLLLLTDDGQ 117

Query: 315 LANQLMHPRFGLEREYAVRVLGALTSEEKQKLLDGVRL-DDGMAQFGTIEDGGGEGSNCW 373
               L HPR  + + Y +  +  +T E+ + L  GV L +DG+ +   I+    + S+  
Sbjct: 118 FLQALTHPRKHVAKVYDLITVDPITPEQIRLLEQGVELRNDGIFKASNIK----QTSSHQ 173

Query: 374 YRVTISEGRNREVRRLFESVGHAVSRLIRIRYGAMVLPRGLKRGAWMELDERDI 427
             + I +G   +V+R+  +VG+ V +L R + G + LP  L  G W  LD+ +I
Sbjct: 174 LSLAIHQGVYHQVKRMLAAVGNKVEKLHRSKIGELELPM-LAEGEWTYLDQTEI 226