Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 171 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 65.5 bits (158), Expect = 5e-16
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 7/152 (4%)

Query: 15  ARYVELRSKLERIVGSRDDAADAMQETWLRLSTTSSSTSDGGTVNNADAYLLRMAANIAT 74
           A +  LR  L R  G R+ AAD  QET++RL           T+    AYL  +A ++  
Sbjct: 18  AHHAWLRGWLSRRTGCREHAADLAQETFVRLLNARRQQ----TLQQPRAYLSSIARSLMI 73

Query: 75  DQYRQNNVLLVHGEIDELMHIVD-EVSDPERIASARSDVQALSQVLGRMPRRRREILVAA 133
           DQYR+    L    ++ L H    EV   E        ++ + ++L ++  R RE  + A
Sbjct: 74  DQYRRRE--LERAYLESLAHFPQVEVPSEETRLLILDSLERIDRLLDQLKPRVREAFLLA 131

Query: 134 RVEGQLNDEIARRFDVSLSTVEKELRAALEFC 165
           +++G    +IA R  VS +TVE++L  AL  C
Sbjct: 132 QLDGLTCAQIALRLGVSKATVERDLSKALHAC 163