Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 192 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score = 67.0 bits (162), Expect = 2e-16
 Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 9/164 (5%)

Query: 10  RARMVARYVELRSKLE----RIVGSRDDAADAMQETWLRLSTTSSSTSDGGTVNNADAYL 65
           RA  +  ++  RS++E    R VG R  AAD +Q+ +LR             V     YL
Sbjct: 21  RAHFLQVFLSQRSQMEALVSRRVGCRATAADLVQDLFLRFWRRPLVQ-----VEELSTYL 75

Query: 66  LRMAANIATDQYRQNNVLLVHGEIDELMHIVDEVSDPERIASARSDVQALSQVLGRMPRR 125
           LR A NIA D  R         E        ++ S+P+    A +D++ +   L  +P R
Sbjct: 76  LRCAGNIAIDHLRSEGARARSSEGWLPEQQDNQGSEPQAALEAGNDLRHVEAALRSLPER 135

Query: 126 RREILVAARVEGQLNDEIARRFDVSLSTVEKELRAALEFCKQHL 169
            R+I +  R+ G+   +IA+   +S S VEK +  ALE CK  L
Sbjct: 136 TRQIFLLNRIHGRKYAQIAKAMGLSQSAVEKHMMRALEACKASL 179