Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

 Score = 70.1 bits (170), Expect = 2e-17
 Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 9/157 (5%)

Query: 13  MVARYVELRSKLERIVGSRDDAADAMQETWLRLSTTSSSTSDGGTVNNADAYLLRMAANI 72
           +V R   LR+ L+R+VG+   A D +QET+LR+S           + + + ++ + A N+
Sbjct: 11  LVQRLTLLRT-LQRMVGNPSTAEDLLQETYLRVSRALGERP----IEHIEPFVFQTARNL 65

Query: 73  ATDQYRQNNV---LLVHGEIDELMH-IVDEVSDPERIASARSDVQALSQVLGRMPRRRRE 128
           A D  R   V   +LV    DE++H +    +  E  A A   ++ LS  L ++  R++ 
Sbjct: 66  ALDHLRARRVQARMLVDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQR 125

Query: 129 ILVAARVEGQLNDEIARRFDVSLSTVEKELRAALEFC 165
           I + +R+ G    EIA +  VS STV+KEL+  +  C
Sbjct: 126 IFILSRLHGATYLEIAEQLSVSPSTVQKELKLIMAIC 162