Pairwise Alignments

Query, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 169 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

 Score = 91.3 bits (225), Expect = 8e-24
 Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 11/164 (6%)

Query: 12  RMVARYVELRSKLERIVGSRDDAADAMQETWLRLSTTSSSTSDGGTVNNADAYLLRMAAN 71
           R + RY+  R++      S+ D+ D  QE W++L+   ++            YL+R+A +
Sbjct: 17  RRIKRYLISRTR------SQADSDDLAQEAWIKLARNGAAALAAPV-----PYLMRIARS 65

Query: 72  IATDQYRQNNVLLVHGEIDELMHIVDEVSDPERIASARSDVQALSQVLGRMPRRRREILV 131
           +A D  R     L   +ID LM + DE   PE+    R  V+ L +++  +P R+R++LV
Sbjct: 66  LAVDHDRGQKRKLTSNDIDVLMSVADEQPGPEKQFEDRDQVRCLIEIIDELPERQRKMLV 125

Query: 132 AARVEGQLNDEIARRFDVSLSTVEKELRAALEFCKQHLPDVEAA 175
           A R++ + + +IA  F VS+ TVE E+R A+++C++ L  +  A
Sbjct: 126 ACRLDQRRHADIAAEFGVSIRTVELEVRKAVDYCRERLETINRA 169