Pairwise Alignments

Query, 332 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Variovorax sp. SCN45

Subject, 217 a.a., bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA from Dickeya dianthicola ME23

 Score =  107 bits (268), Expect = 2e-28
 Identities = 79/209 (37%), Positives = 106/209 (50%), Gaps = 15/209 (7%)

Query: 107 VYEDEHLRIVDKPAGLVVHPAPGHWSGTLLNGLLALDPKAALLPRAGIVHRLDRDTSGLM 166
           +Y+D+H+ +V+KP+GL+  P         +   +  D      P A  VHRLD  TSG+M
Sbjct: 15  LYQDQHIMVVNKPSGLLSVPGRAEEHKDSIMTRIQAD-----FPAAESVHRLDMATSGVM 69

Query: 167 VVARTRATMDAMVALIAAREVKRQYLAI--GHKPWVGAAARQVDAPIGRDPRNRLRMAVV 224
           VVA T+A    +      RE K+ YLA   GH P   +    VD P+  D  NR +  V 
Sbjct: 70  VVALTKAAERELKRQFREREPKKSYLARVWGHLP---SDDGLVDLPLICDWPNRPKQKVC 126

Query: 225 DLERHAGKTARTLIERLDSHSEGCV-VRCTLETGRTHQIRVHMASIGHPLVGDALYGGAP 283
             +   GK A+T    L   S+G   V+    TGR+HQ+RVHM ++GHP++GD  Y    
Sbjct: 127 FEQ---GKPAQTGYTVLSRGSDGTTRVKLMPITGRSHQLRVHMLALGHPILGDGFYAHPQ 183

Query: 284 A-VGLSRQALHAFRLAFVHPVTQEPMEFR 311
           A V   R  LHA  LA  HP    PM FR
Sbjct: 184 AKVMAPRLLLHAQELAIAHPAFNTPMHFR 212