Pairwise Alignments

Query, 696 a.a., DinG family ATP-dependent helicase YoaA from Variovorax sp. SCN45

Subject, 762 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 79.3 bits (194), Expect = 6e-19
 Identities = 164/668 (24%), Positives = 246/668 (36%), Gaps = 132/668 (19%)

Query: 18  ALSRAAEQFRERSGQTEMAMAVARTIDQGGVLVVEAGTGVGKTFSYLVPALLSGERVLLS 77
           ALS    QFR+  GQ ++A  + + +  G  L+ +A TG+GKT   L P        LL 
Sbjct: 184 ALSFPYPQFRK--GQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFP--------LLK 233

Query: 78  TATKTLQDQLFGRDLPRLVEAFGLPVRTALLKGRGSYLCLHRLDTARHDASLPERGSLRT 137
                  D+LF                TA   GR        LD  R       + +LRT
Sbjct: 234 AMVPQQLDKLF--------------FLTAKTPGRAL-----ALDALRQITDATPQPALRT 274

Query: 138 LAKIEQWSKATRTGDLA--------------ELPGLDERSPLIPLI--TSTRENCLGAQ- 180
           L  I +  KA    D A               LP   E +  +PL+   + RE  L  Q 
Sbjct: 275 LELIAR-DKACEYPDKACHGESCPLAAGFYDRLPAAREAAAALPLLDRANLREVALAHQV 333

Query: 181 CPQFKACHVNLARREALAADIVVINHHLFFADLAVRETGMAELLPTVSVVVFDEAHQLNE 240
           CP +      L +  A  AD++V +++ +F D      G+ +L      V+ DEAH L E
Sbjct: 334 CPYY------LGQEMARWADVLVADYNYYF-DAHALLFGLTQLNQWRVAVLVDEAHNLVE 386

Query: 241 TGVQFLGAQLGSGQALDFARDMLGSGLQHARGLVDWQQLVSGVERTARELRLVVGKQWPG 300
            G     A L  GQ L          L+ ++       LVS ++R  R+   +  +Q   
Sbjct: 387 RGRGMYSASLDQGQLL---------ALRQSKP----PGLVSALDRLNRQWNALYKEQ--R 431

Query: 301 AKLRWLGPAPEGIDPDAWQSALDDLQHSFEQAAEGLATVSEISPDFVRLHERARQLAKRT 360
           A  +     PEG+   A Q  +  +Q    QA       + I P  ++ + +A Q  +  
Sbjct: 432 APYQASESLPEGL-LRALQQCVGVIQEQMNQAP------THIDPQVLQFYYQALQFCRVA 484

Query: 361 ARFALPCEVDSVRWVDVGSQLRLIESPLDIADAMRKRVLKIVDEAGADADDDGDDSDDEL 420
             F      D     D+  +              RKR L                    L
Sbjct: 485 ELF------DEHFLFDISQR-----------QGPRKRRLA------------------TL 509

Query: 421 DAYGERSAREAPVQEDGGRAWVFTSATLGDEPTLRWFTEPCGL-HDAEVLRVQSPFDYAS 479
                  AR    +    R+    SATL       ++++  G+  D   L V +PF  A 
Sbjct: 510 CLRNVTPARLLAPRMQAARSVTLFSATLSPR---HFYSDLLGMPADTAWLDVAAPF-RAE 565

Query: 480 QAALYVPRAFPKPNDPSHSQRVAQLA------ARGAAELGGRTLVLTTTLRALRTIGDAI 533
           Q  + +           + QR A LA      AR    + G  L   ++   L+ +   +
Sbjct: 566 QLEVRIASQV----STRYQQRQASLAPIVDLIARQYERMPGNYLAFFSSFEYLQQVAGLL 621

Query: 534 KQQFELLETEARPEVLVQGELPKRVLMDRFREGASAGRAGCVLVASASFWEGFDAPGDAL 593
            +Q   +   ++   +   E  ++  +DRF    + GR     V   +F EG D PG  L
Sbjct: 622 AEQHGQIPLWSQEPGM--DEAARQAFLDRF---VADGRGVGFAVLGGAFGEGVDLPGTRL 676

Query: 594 QLVVIDKLPFPPPNDPLVEARSQRLEAQGRSSFADYSLPEAAVALKQGAGRLIRRETDSG 653
               +  L  P  N P+ E   QRL  Q  + F    L      + Q AGR+IR + D G
Sbjct: 677 IGAFVATLGLPQVN-PVNEQFKQRLGRQFGAGFDYAYLYPGVRKVIQAAGRVIRGDQDRG 735

Query: 654 VLAICDTR 661
           VL + D R
Sbjct: 736 VLVLIDER 743