Pairwise Alignments

Query, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 331 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 79/276 (28%), Positives = 123/276 (44%), Gaps = 30/276 (10%)

Query: 17  AEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREVMRTWSALDPLLAEEAARQASRA 76
           A AW + L SG  +  + + F +W+     HA+AWR++      LD   +   A   +RA
Sbjct: 17  AIAWQLSLDSGDGSAIEREEFDKWLASDEEHARAWRQL----GMLDQRFS--VASGPARA 70

Query: 77  GTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDP-----PLGLWPSVGDLTADY 131
             L  R      G+    R+  LG  +A+      +AL       P+  W       AD 
Sbjct: 71  ALLQSRE-----GIRQRVRK--LGSGLASVALVIGLALFAGERYVPIHYW------LADQ 117

Query: 132 RTATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGE--AEIAANGASDFLVE 189
           RTATGEQR + L+ G  + +NT + I+ +  D   R +VL  GE   E   N    F V+
Sbjct: 118 RTATGEQRTLKLSDGTLINLNTHSAID-VRFDEKRRLVVLQEGEILVETGHNDERPFYVQ 176

Query: 190 TGGGRLVARSARFNIRHTGPQVCVTCLDGRLTVSVNG--EQRALEAGRQVTFDRAGLQEV 247
           T  G L A   RF ++       ++ L   +        +++  + G+QV     GL  +
Sbjct: 177 TRDGSLRALGTRFIVKREDDATRLSVLQSAVAAQPEALHQEQVFKEGQQVLMRSDGLGPL 236

Query: 248 VRADEASVSTWRTGVLSFDRMPLAEVIDEINRYRPG 283
           +    A+   W  G+L  D   L EV++E++RYR G
Sbjct: 237 LAVTPAT-DAWTRGMLVVDNARLGEVVEELSRYRTG 271