Pairwise Alignments

Query, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 316 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 93.6 bits (231), Expect = 6e-24
 Identities = 88/322 (27%), Positives = 136/322 (42%), Gaps = 30/322 (9%)

Query: 16  QAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREVMRTWSALDPLLAEEAARQASR 75
           +A  W+VRL     + A+   F  W      H   +  +   WSA    L  +A  QA  
Sbjct: 8   EAAQWFVRLQDAELSIAERQRFDAWRNEHPDHQYEFDVLQGLWSATG--LLPKARLQAL- 64

Query: 76  AGTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDPPLGLWPSVGD---LTADYR 132
                         +  P RRA L  AVAA    GV+A+   LGL+  +      +A++ 
Sbjct: 65  ----------CEAPVERPKRRAVLRYAVAA----GVIAVALGLGLFSGLDHPKPYSAEFS 110

Query: 133 TATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGEA--EIAANGASDFLVET 190
           T  GE RQVAL  G  + +N++T++  +  +   RG+ L  GEA   +  + +  F+V  
Sbjct: 111 TGVGEHRQVALPDGSVMDLNSRTVV-AVQYEKGRRGVELKQGEAMFSVEHDTSRPFVVAA 169

Query: 191 GGGRLVARSARFNIRHTGPQVCVTCLDGRLTVSVNGEQR----ALEAGRQVTFDRAG-LQ 245
           G G++     RF++R    Q  V    G  TV V G+       L AG     D  G + 
Sbjct: 170 GAGQVTVTGTRFDVRRDEGQTRVMVEAG--TVKVQGDSPDNLVTLTAGLGTHVDNKGSVA 227

Query: 246 EVVRADEASVSTWRTGVLSFDRMPLAEVIDEINRYRPGKVFLRNEELGRTPVRMQLNLRS 305
                +   ++ WRTG L F+   L EV  E++RYR   + +    +G   +        
Sbjct: 228 AAYTVNTEELTAWRTGKLVFNNALLGEVAREVSRYRERPLRVSTPAVGNLRLTSVFKAND 287

Query: 306 IDNALVMIRELYGARMRSLPGG 327
            D  L  +  +    +R+LP G
Sbjct: 288 TDALLKALPHILPVALRTLPDG 309