Pairwise Alignments

Query, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 325 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  113 bits (283), Expect = 6e-30
 Identities = 93/324 (28%), Positives = 146/324 (45%), Gaps = 14/324 (4%)

Query: 14  QRQAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREVMRTWSALDPLLAEEAARQA 73
           Q QA   W+ L   + +  D   F +W+    AH +A+ +    W      L+E  AR+ 
Sbjct: 9   QEQAALAWLSLLHDQPSGGDQATFSQWLRADPAHVEAYAQAQVLWE-----LSEVPARKL 63

Query: 74  SRAGTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDPPLGLWPS--VGDLTADY 131
           +    L L+G   A+      R A   GA+A +    +M     +G  PS  V D  ADY
Sbjct: 64  ADEEALVLQGYLNAMNPSKRSRVARWSGALAMAACLLLMVF-MGVGWQPSRWVDDFGADY 122

Query: 132 RTATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLV--AGEAEIAANGASDFLVE 189
            TA GE + V LA    V ++  + I  +      R + L   AG   +   G S F+VE
Sbjct: 123 VTAPGEVKTVTLADQSQVTLDADSAI-AVDFTQGERHIQLRRGAGFFSVTHTGQS-FVVE 180

Query: 190 TGGGRLVARSARFNIRHTGPQVCVTCLDGRL--TVSVNGEQRALEAGRQVTFDRAGLQEV 247
            G G       +F +R       VT L GR+  T S  G+Q+ L AG+QV +       +
Sbjct: 181 AGSGEARVLGTQFEVRLQPAGAEVTVLSGRVGVTPSKQGQQQILTAGQQVAYAEGVADAL 240

Query: 248 VRADEASVSTWRTGVLSFDRMPLAEVIDEINRYRPGKVFLRNEELGRTPVRMQLNLRSID 307
              D  S   WR G L++ + PL++V+ ++ RY PG++ L N+E+G   V      +   
Sbjct: 241 HAVDSESRLAWRDGWLNYYKAPLSDVVKDLERYYPGRILLLNKEMGAKRVSGSFPSKDPQ 300

Query: 308 NALVMIRELYGARMRSLPGGIVVL 331
             L  ++ + G    +L G ++V+
Sbjct: 301 AVLNALQAVLGFEQHTLLGRMIVV 324