Pairwise Alignments

Query, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  114 bits (286), Expect = 3e-30
 Identities = 96/285 (33%), Positives = 134/285 (47%), Gaps = 32/285 (11%)

Query: 10  ESLLQRQAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWRE---VMRTWSALDPLLA 66
           + L+  +A  W V+L SG AT AD  A + W   S  HAQAW+    ++  +  L   + 
Sbjct: 7   DPLILGEAADWLVQLQSGTATEADHRAVQAWCKRSAQHAQAWQRAEAILGDFRRLPTPVT 66

Query: 67  EEAARQASRAGTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDPPLGLWPSVGD 126
            E  R+ SR G +S R     LGL            + A+  A +   + P   W     
Sbjct: 67  GETLRRLSRNGAVSRRQALHRLGLW-----------LLAAPAAWLAWRETPWQQW----- 110

Query: 127 LTADYRTATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGE-----AEIAAN 181
            TAD  TA GEQR + LA G  V +NT T I+ I  DA  R + L+AGE     A+  A 
Sbjct: 111 -TADAHTAVGEQRTLTLADGSQVLLNTDTAID-ITFDARQRRIDLLAGEILLTSAKDPAT 168

Query: 182 GASDFLVETGGGRLVARSARFNIRHTGPQVCVTCLDGRL-TVSVNGEQRALEAGRQVTFD 240
            A    V T  G+  AR  RF++R  GP   V  L+G + T  ++ +   L+AG +  FD
Sbjct: 169 PARPLSVRTPHGQATARGTRFSVRIHGPLTQVAVLEGAVDTRPLHADSLLLKAGERSAFD 228

Query: 241 RAGLQEVVRAD--EASVSTWRTGVLSFDRMPLAEVIDEINRYRPG 283
                 V+ A   E     W  G+L    M LA+++ E+ RYRPG
Sbjct: 229 G---DRVLPASPLETGDLAWEHGMLLARDMRLADLLQELARYRPG 270