Pairwise Alignments

Query, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 351 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 83/328 (25%), Positives = 132/328 (40%), Gaps = 28/328 (8%)

Query: 8   DSESLLQRQAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREVMRTWSALDPL--L 65
           D+ +    +A  W VRL    A  AD  AF  W++ +  +A+A+ E    W+   PL  +
Sbjct: 46  DARARAMDEALDWLVRLQCADA--ADTQAFEAWLSAAPENAEAYVEAEALWNGT-PLHKV 102

Query: 66  AEEAARQASRAGTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDPPLGLWPSVG 125
           A    +Q  R+    LR     L             A AA +  G+  +    G  P   
Sbjct: 103 ATHMHQQQRRSWRGRLRSHWKPL-------------ATAALLLVGLFTV----GNLPM-- 143

Query: 126 DLTADYRTATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGEA--EIAANGA 183
            L AD+ T  GE++++ L  G  V +NT +       D      +L  GEA  ++     
Sbjct: 144 RLQADHLTVVGERQRLQLEDGAKVLLNTNSAFASERQDGRQVARLL-QGEAYFQVPEGAQ 202

Query: 184 SDFLVETGGGRLVARSARFNIRHTGPQVCVTCLDGRLTVSVNGEQRA-LEAGRQVTFDRA 242
               VE G  R   R   F +R+   +  V    G + +    +QR  L AG  ++    
Sbjct: 203 LPLEVEAGPLRAQVRDTDFAVRYLDGEAQVRVQRGDVDLQGERDQRIRLSAGDSISVGPQ 262

Query: 243 GLQEVVRADEASVSTWRTGVLSFDRMPLAEVIDEINRYRPGKVFLRNEELGRTPVRMQLN 302
           G  +  R D      W  G L F+  PL++V+ E+ RY PG +  RN +L    V     
Sbjct: 263 GFGQRQRPDMHKDLAWIDGRLVFENCPLSQVLAEVQRYYPGWIINRNAQLEHVAVTGNYR 322

Query: 303 LRSIDNALVMIRELYGARMRSLPGGIVV 330
           L      L  +  +  A++   P  +++
Sbjct: 323 LDQPLETLRALAHITSAQLHEYPALVIL 350