Pairwise Alignments

Query, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 78/288 (27%), Positives = 119/288 (41%), Gaps = 33/288 (11%)

Query: 13  LQRQAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREVMRTWSALDPLLAEEAARQ 72
           ++ QA AW+ R+               W+     H + +  + R W A D +  +     
Sbjct: 17  VREQAAAWFARVQDAPRDAGLHKQLHAWLASDEHHREEYEHLCRVWQAADFIPRQH---- 72

Query: 73  ASRAGTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDPPLGLWPSVGDLTADYR 132
                   L  L     +    RR F+  A+AASV    + L      W     L  +++
Sbjct: 73  --------LEALCRPDPVQQLPRRRFMRQALAASVAVVALGLG-----WSGWHHLQLNHQ 119

Query: 133 ----TATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGEA--EIAANGASDF 186
               TA  E+RQV L  G  + +N  T + ++   A  R + L AGE    +A +    F
Sbjct: 120 GSLQTAFNERRQVELPDGSHLELNGNTQL-QVEFSAGQRHVRLNAGEVMFSVAHDSNRPF 178

Query: 187 LVETGGGRLVARSARFNIRHTGPQVCVTCLDGRLTVSVNGEQRA-LEAGRQVTFDRAGLQ 245
           +V+T  G ++    RF++R       V    G + V   G+  A L AG+    D  GL 
Sbjct: 179 VVDTAQGSVIVTGTRFDVRLDPASTRVAVEQGSVRVQGKGDSPAQLTAGQGSHIDAQGLV 238

Query: 246 EVVRA-DEASVSTWRTGVLSFDRMPLAEVIDEINRYR-------PGKV 285
               A +  +++ WR G L FD   LAEV+ E +RYR       PGKV
Sbjct: 239 AAPYAVNTGAITAWRQGKLVFDNATLAEVVAETSRYRRQPLRVAPGKV 286