Pairwise Alignments

Query, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 316 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 73.9 bits (180), Expect = 5e-18
 Identities = 80/281 (28%), Positives = 116/281 (41%), Gaps = 40/281 (14%)

Query: 16  QAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREVMRTWSALDPLLAEEAAR---- 71
           QA  W V+L     +      F+ W+     +  AW+ V      L  L  + + R    
Sbjct: 13  QAIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAWQRVSNLGDELAGLPKDLSRRTLDA 72

Query: 72  ----QASRAGTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDPPLGLWPSVGDL 127
               +ASR   L L GL A            +GG++         A   PLGL      L
Sbjct: 73  SQHPKASRRDHLKLLGLLA------------VGGSLG-------WAAREPLGL----PQL 109

Query: 128 TADYRTATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGEAEIAANGASD-- 185
            AD  TATGE+RQ   + G  +++NT + I+ +   A  R L L+ GE  + +N   +  
Sbjct: 110 LADTSTATGERRQWQGSDGSRLQLNTASAID-LHYSAEQRQLKLIHGEVSLESNPNDNRP 168

Query: 186 FLVETGGGRLVARSARFNIRHTGPQVCVTCLDGRLTV---SVNGEQRALEAGRQVTFDRA 242
           F V T  G L     +  +R     + ++   G +T+   S +  Q       QVT D +
Sbjct: 169 FHVATRVGPLTTFDGQLLLRENSQGLLLSVRRGEVTLFPASASARQVLPGETLQVTADGS 228

Query: 243 GLQEVVRADEASVSTWRTGVLSFDRMPLAEVIDEINRYRPG 283
                +  D      W  GVLS  +MPLAE   E+ RYRPG
Sbjct: 229 IQARTLHNDPWG---WTEGVLSVQQMPLAEFASELGRYRPG 266