Pairwise Alignments

Query, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

Subject, 318 a.a., putative Transmembrane sensor protein from Pseudomonas putida KT2440

 Score = 86.3 bits (212), Expect = 9e-22
 Identities = 87/286 (30%), Positives = 123/286 (43%), Gaps = 24/286 (8%)

Query: 4   MSFSDSESLLQRQAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREVMRTWSALDP 63
           MS     S +   A AW + L     T  + + F  W   S  HA+AWR++     A+D 
Sbjct: 1   MSNLPVSSRVLEAAIAWKLSLGESSGTPDERNEFMRWHAASEEHARAWRQL----GAMDQ 56

Query: 64  LLAEEA--ARQASRAGTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDPPLGLW 121
            ++  A  ARQA      SLR     +G    G   FL GA+ A V  G  +L P   L 
Sbjct: 57  RVSAAAGPARQALLQSRASLRRRIGKVGGGLAG--TFLLGALLAWV--GAPSLAPSYWL- 111

Query: 122 PSVGDLTADYRTATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGE--AEIA 179
                  AD RTATGE R + L  G  + +NT T ++ I    + R +VL  GE   E  
Sbjct: 112 -------ADQRTATGELRTLRLEDGTLLSLNTHTAVD-IEYAGAQRVIVLHQGEISVETG 163

Query: 180 ANGASDFLVETGGGRLVARSARFNIRHTGPQVCVTCLDGRLTVSV--NGEQRALEAGRQV 237
                  LV T  GRL     RF +R       +  L   +      +G+++ L  G+QV
Sbjct: 164 HQDPRPLLVRTEDGRLRPLGTRFLVRREAGGTRLEVLQASVAAMPHDSGDEQVLREGQQV 223

Query: 238 TFDRAGLQEVVRADEASVSTWRTGVLSFDRMPLAEVIDEINRYRPG 283
             +  GL EV     A    W  G+L  D + L +++  + +YR G
Sbjct: 224 LMNANGLGEVGTV-PAGADAWTRGMLVVDNVRLGDLLATLGQYRSG 268