Pairwise Alignments

Query, 846 a.a., Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) from Variovorax sp. SCN45

Subject, 520 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  146 bits (369), Expect = 3e-39
 Identities = 133/514 (25%), Positives = 226/514 (43%), Gaps = 65/514 (12%)

Query: 351 GRITYVNAAFCAMTGWSEEELVGQS-------PPFPYWLESDREVMN--ERLEEELHGRA 401
           G + YVN  +CA TG S     G            P  L S RE +   E   +EL  + 
Sbjct: 23  GNVDYVNQGWCAYTGRSANAATGSGWLAAVHPDDLPATLNSWREAVRNGEPYRKELRLQQ 82

Query: 402 LPGGFQVRVKRKNGSVFNARLYVS---PLIDARGHQTGWMTSMTDITEPTRIRE------ 452
             GG+              R +VS   P+ D       W     DI E  R +       
Sbjct: 83  ADGGY--------------RWFVSDGKPMRDNHDRIIRWWVVSVDIDEHKRDKALIAHAL 128

Query: 453 -QLSASYERFTTVLEALDAAV-SVAPIGSEELLFANKLYRLWFGSDTVGHLGMVAQAGVP 510
            ++SAS +R + ++ A+   V S AP GS  + F N+ +      D  G     A+    
Sbjct: 129 AEVSASEDRLSNIINAIPGFVWSAAPDGS--VGFVNQRW-----CDYTGMSLDEARGNGW 181

Query: 511 ASNAHDEGLDDVDPYAGLPIDTLTAAQTANNEIFVPHLGKWLEVRS--------RYLTWV 562
           A + H +  + +  Y G  + +  A +            +W  VR+          L W 
Sbjct: 182 ARSVHPDDAEQLARYWGALLRSGEAGEYEARLRRFDGDYRWFLVRAVPQRDEWGAVLRWY 241

Query: 563 -------DGRLAQLVIATDITPRRDAEEQAAAQADKAQAASRLITMGEMASSVAHELNQP 615
                  D + A+++ A+    R+ +EE  +    +    +R+ ++  + +S+AHE+NQP
Sbjct: 242 GENTDIEDRKRAEMLAASIAVERQLSEETLSKVRSELAHLARVASLSTVTASIAHEVNQP 301

Query: 616 LTAITNYCNGMMSRIKGQTIDTEALLAALEKTSKQAQRAGQIIQRIRSFVKRSEPNRTPA 675
           L  I    +  +  +     +    L    +T +   RA ++I R+R+   +      P 
Sbjct: 302 LAGIITNASTCLRMLGADPPNVTGALETARRTIRDGNRAAEVINRLRALFSKKCITLEPV 361

Query: 676 DVATMVSEAVELAGIELRRRNVRLNHYVAARLPVVRVDPILIEQVMVNLLKNAAESIDIA 735
           D+     E + +   EL+R +V+L+   A  LP V+ D + ++QV++N++ NA E+++  
Sbjct: 362 DLNEAAREVIAMLLGELQRNDVKLHPEFADALPTVKADRVQLQQVILNMILNATEAMN-- 419

Query: 736 DRPLARRSVELRVLPKVIEGHNAIEFSVQDTGKGLAPEVMDRLYEAFFSTKPEGMGIGLN 795
              +  RS  L V   + E H  +  +V+D G G  P   +RL++AF++TK  GMGIGL+
Sbjct: 420 --TMTGRSRHLHVTTGLDE-HQGVYLAVKDNGNGFDPRDAERLFQAFYTTKTTGMGIGLS 476

Query: 796 LCRTIVESHRGRMQAENIYNGPDVIGCRFSFWIP 829
           + R+I+E H G + A   ++GP   G  F F +P
Sbjct: 477 ISRSIIERHDGVLWA-TAHSGP---GATFQFALP 506