Pairwise Alignments

Query, 846 a.a., Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) from Variovorax sp. SCN45

Subject, 1682 a.a., Sensor histidine kinase/GAF domain protein from Pseudomonas putida KT2440

 Score =  115 bits (288), Expect = 2e-29
 Identities = 73/248 (29%), Positives = 132/248 (53%), Gaps = 13/248 (5%)

Query: 583  EQAAAQADKAQAASRLITMGEMASSVAHELNQPLTAITNYCNGMMSRIKGQTIDTEALLA 642
            E   ++A+ A++A  L  M E+++S+AHE++QPL  I +     +  +K    D E  +A
Sbjct: 1445 ELRRSRAELARSA-HLQAMNELSASIAHEISQPLLGIASNAAASLRWLKRAKPDLEEAIA 1503

Query: 643  ALEKTSKQAQRAGQIIQRIRSFVKRSEPNRTPADVATMVSEAVELAGIELRRRNVRLNHY 702
             LE     ++RAG I++ +RS  K+S        +  ++ E V L   +  +  V +   
Sbjct: 1504 GLEDIRNDSERAGNIVRALRSLAKQSPMQLKAVKLDELIREVVRLTSADAAKGKVDVQTR 1563

Query: 703  VAARLPVVRVDPILIEQVMVNLLKNAAESIDIADRPLARRSVELRVLPKVIEGHNAIEFS 762
            + A +  V  DP+ ++Q++ NL+ NA E++        R    L++   V+E  + +E  
Sbjct: 1564 LKAGV-CVTADPVQLQQLVFNLITNALEAL-----AGYRCDGVLKITSAVVE--DEVEIC 1615

Query: 763  VQDTGKGLAPEVMDRLYEAFFSTKPEGMGIGLNLCRTIVESHRGRMQAENIYNGPDVIGC 822
            V D G G+A +  +R+++AF +TK  GMG+GL +C ++ ++H G++QA     G    GC
Sbjct: 1616 VDDNGPGIAADERERVFDAFHTTKTGGMGMGLAICSSVAQAHGGQLQALVSQLG----GC 1671

Query: 823  RFSFWIPV 830
            R    +P+
Sbjct: 1672 RIRVSLPL 1679