Pairwise Alignments

Query, 220 a.a., RNA polymerase ECF-type sigma factor from Variovorax sp. SCN45

Subject, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score = 92.0 bits (227), Expect = 6e-24
 Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 1/151 (0%)

Query: 66  LQAHLAANYQALHRRLERQLGCADLASECLHDAWLRLGERQPRETPANPDAYIYRVACNL 125
           L+  L + Y     RL R+ G  D+A + LH+ WLR+         A+P AY+ R+A N+
Sbjct: 10  LRGLLTSRYVDFRNRLRRRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNV 69

Query: 126 AMDGMRERKRWMGLNEDCEDVDVIADLQPGPDMIAEARSEVAAVDRAMQGLPGRHRAVLV 185
           A D      R +   E  E++   AD    P  ++EARSEV A++RA++ LP R R + +
Sbjct: 70  AEDRRIANGRLLDFVE-VEELLHFADDSRDPARVSEARSEVQALERALEELPRRRREIFL 128

Query: 186 ALRWHEMSRQEVARRHGVSLRKVDTALRQAL 216
           A R  E   +++A R+GVS+R V+  ++ AL
Sbjct: 129 ASRVDETPHKDIALRYGVSVRIVEREVKAAL 159