Pairwise Alignments

Query, 240 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 213 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 18/177 (10%)

Query: 5   IVLDTETTGLSAENGDRVIELGCVELFNRKLTGNDLHIYFNPERESHEDALKVHGLTTDF 64
           +V+DTETTGL  +  D ++  G +++ N ++        F   ++ +  ++K+H +    
Sbjct: 29  LVVDTETTGLDVKK-DHILAFGGIKVSNNRILVQSSREQFVHSKKKNASSIKIHEIVQPS 87

Query: 65  LRDKPKFATLANDIVEYLRDAELIIHNAAFDVGFLNKEFERAGFPPLRTFVAEVTDTLAM 124
               P+        + YL    L+ H+A FD+  + K     G   LR     V DT  +
Sbjct: 88  NAISPR--EFVRGFLPYLGSDILVAHHAGFDLAMIEKICYPFG---LRKLANPVVDTGDL 142

Query: 125 AKLVYPG----------KRNSLDALCDRFGVDRSNRTFHGAKLDAQLLADVYINLTR 171
           A  +  G          +  SLD LC+R+ +   +R  H A  DA L A + + L +
Sbjct: 143 AMRLEHGIHYDPSRINLRDYSLDKLCERYNIPIQDR--HTAAGDAFLTAQLLLKLLK 197