Pairwise Alignments

Query, 702 a.a., Excinuclease ABC subunit B from Variovorax sp. SCN45

Subject, 670 a.a., excinuclease ABC subunit B from Dickeya dianthicola ME23

 Score =  855 bits (2210), Expect = 0.0
 Identities = 431/666 (64%), Positives = 532/666 (79%), Gaps = 3/666 (0%)

Query: 33  FELFQPYPPAGDQPKAIEGLVEGVIDGEVFQTLLGVTGSGKTYTMANVIARLGRPAIVFA 92
           F+L   + PAGDQP+AI  L +G+ DG   QTLLGVTGSGKT+T+ANVIA L RP +V A
Sbjct: 5   FKLHSDFKPAGDQPEAIRRLEDGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVLA 64

Query: 93  PNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQMRL 152
           PNKTLAAQLY E + FFP+NAVEYFVSYYDYYQPEAYVP  D FIEKD+S+NEHIEQMRL
Sbjct: 65  PNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124

Query: 153 SATKSVLERRDTVIVATVSAIYGIGTPEDYMEMRLIARVGDKVGQRDLISRLIRMQYLRN 212
           SATK++LERRD V+VA+VSAIYG+G P+ Y++M L    G  + QR ++ RL  +QY RN
Sbjct: 125 SATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQYARN 184

Query: 213 EQDFARGTFRVRGDTIDVFPAEHSELAIRFELFDDEIESLQLFDPLTGRIRQKVPRFTVY 272
           +Q FARGTFRVRG+ ID+FPAE  ++A+R ELFD+E+E L LFDPLTG I Q VPR+T+Y
Sbjct: 185 DQAFARGTFRVRGEIIDIFPAESEDIALRVELFDEEVERLSLFDPLTGHIVQTVPRYTIY 244

Query: 273 PSSHYVTPRDKVMAAVETIKIELAGRLKELVGAGKLVEAQRLEQRTRFDLEMLAEIGHCK 332
           P +HYVTPR++++ A+E IK+ELA R + L+   KL+E QRL QRT FDLEM+ E+G+C 
Sbjct: 245 PKTHYVTPRERILQAMEEIKVELADRRQVLLAGNKLLEEQRLAQRTTFDLEMMNELGYCS 304

Query: 333 GIENYTRHLSGAAPGDPPATLTDYLPKDALMFLDESHQMVGQLSAMYNGDRARKTTLVEY 392
           GIENY+R LSG  PG+PP TL DYLP D L+ +DESH  + QL  MY GDRARK TLVEY
Sbjct: 305 GIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKETLVEY 364

Query: 393 GFRLPSALDNRPLKMEEFEARVRQCIFVSATPAQYEKDHA-GNVVEQLVRPTGLIDPEVE 451
           GFRLPSALDNRP+K EEFEA   Q I+VSATP  YE + + G V++Q+VRPTGL+DP++E
Sbjct: 365 GFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLDPQLE 424

Query: 452 VRPATHQVDDVLGEIRVRVEKNERVLITTLTKRMSEQLTDYLGDNGVKVRYLHSDVDTVE 511
           VRP T QVDD+L EIR R   NERVL+TTLTKRM+E LT+YL ++G +VRYLHSD+DTVE
Sbjct: 425 VRPVTTQVDDLLSEIRKRAVINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVE 484

Query: 512 RVEILRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAAR 571
           RVEI+RDLRLG FDVLVGINLLREGLD+PEVSLVAILDADKEGFLR+ERSLIQTIGRAAR
Sbjct: 485 RVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544

Query: 572 NLNGKAILYADRMTDSMKKAIDETERRRARQIAHNEANGITPRSIVKQVRDLID-GVYSE 630
           NLNGKAILYADR+T SM++A++ET+RRR +Q A+NE +GI P+ + K++ DL+  G  + 
Sbjct: 545 NLNGKAILYADRITPSMERAMNETQRRREKQQAYNEQHGIVPQGLNKKIGDLLQIGQSAN 604

Query: 631 KTGKEMAKLDLE-RAKVEDMSEKDIAREIKRLEKQMLEHARNLEFEKAARVRDQLALLRE 689
             GK   K   E  A+ + +S K + ++I+ LE QML HA+NLEFE+AAR+RD++  LRE
Sbjct: 605 GRGKGRGKKAAEPAAQYQQLSPKALDQKIRELESQMLTHAQNLEFEEAARLRDEIHALRE 664

Query: 690 QAFGAA 695
           Q   A+
Sbjct: 665 QFIAAS 670