Pairwise Alignments

Query, 259 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 45/273 (16%)

Query: 3   GAVQVEAMFSADPKAHFELHWHAEWSVGAILEGRCEFTCAGERRIAGAGDIVLMAPFMLH 62
           G  ++EA F+      F+ H H  +++G  L G   F   G+   +  G  +++ P   H
Sbjct: 19  GLDRIEAYFAGFA---FDPHRHDTYAIGRTLMGVQSFHYRGDMVHSLPGTTMVLHPDETH 75

Query: 63  TAGV-SAQGFRMVMLYVPHAWAEARLGW------PVGLRGEL----------------LN 99
                S +GF+  M+YV  +  +  LG       P GL  +                 ++
Sbjct: 76  DGHAGSDEGFKYRMIYVEPSLIQQILGGKPLPFIPNGLSTDPRLFRASEVLLQNLENPID 135

Query: 100 GVWHDAAMADALACAARSGDGVAVGRLLEHVLRAQTGRELVPVERRAGDERVEAICTALE 159
            +    A+ D LA A  +  G  + R     + A+  RE +            A+  ++ 
Sbjct: 136 PLQEQDALFD-LAHALSNVSGAIISRKTFDYVAAERAREFIH----------SALGRSIT 184

Query: 160 TEDACRIDPGALASRLGVSREHFHRLFRVAVGMAPAHYARLARIGRAKALLREGRAQADV 219
            ++        +A+  G  R    R FR+  G +P  Y  + R+   ++LL +G++  D 
Sbjct: 185 LDE--------MANHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLLAQGQSLVDA 236

Query: 220 AAQCGFADQAHFSRWFRRCFGVTPGNYMAREPR 252
           A   GF DQ+H +R FR  +G+ P  ++    R
Sbjct: 237 AMTAGFTDQSHMTRQFRSTYGMPPSRWVKMSDR 269