Pairwise Alignments

Query, 259 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 291 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 70.1 bits (170), Expect = 5e-17
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 2/123 (1%)

Query: 126 LLEHVLRAQTG-RELVPVERRAGDERVEAICTALETEDACRIDPGALASRLGVSREHFHR 184
           +L H L +Q G RE + ++      +   +   ++      I  G LA    +S  HF R
Sbjct: 163 MLSHTLLSQVGAREGLRLKGGLAAHQRRRLAEYIDQHLEDPISLGQLAGMCALSEYHFAR 222

Query: 185 LFRVAVGMAPAHYARLARIGRAKALLREGRAQ-ADVAAQCGFADQAHFSRWFRRCFGVTP 243
           +FR + G+ P  Y    R+ RA+ALLR G     ++A  CGF+  +HF+  FR+  G TP
Sbjct: 223 MFRQSFGLPPHQYLLARRLTRAQALLRSGALPLGEIALMCGFSSASHFTHRFRQAMGATP 282

Query: 244 GNY 246
           G Y
Sbjct: 283 GEY 285



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 15/145 (10%)

Query: 126 LLEHVLRAQTGRELVPVERRAGDERVEAICTALETEDACRIDPGALA----SRLGVSREH 181
           LL+   RA   RE   +E  +   R   +      E A R+   +LA    S   +S+  
Sbjct: 114 LLDREPRALQLRESTFLEDASQARRFHQLIALNWHEPAERLLTSSLAHEMLSHTLLSQVG 173

Query: 182 FHRLFRVAVGMAPAHYARLARIGRAKALLREGRAQADVAAQCGFADQAHFSRWFRRCFGV 241
                R+  G+A     RLA        L +  +   +A  C  ++  HF+R FR+ FG+
Sbjct: 174 AREGLRLKGGLAAHQRRRLAEY--IDQHLEDPISLGQLAGMCALSEY-HFARMFRQSFGL 230

Query: 242 TPGNYMAREP--------RCGSLPI 258
            P  Y+            R G+LP+
Sbjct: 231 PPHQYLLARRLTRAQALLRSGALPL 255